L’équipe DFME

Membres

Responsable d’équipe : Catherine Fernandez
Permanents Doctorants Contractuels
BALDY Virginie PR PEREIRA Susana DUBOIS Maude (CDD)
BALLINI Christine MC SAUNIER Amélie GAVINET Jordane ATER
BELLAN Gérard DR HASHOUM Hazem
BELLAN-SANTINI Denise DR MATHAUX Coralie
BOUSQUET-MELOU Anne MC RUIZ Cesar
CHEVALDONNE Pierre DR CNRS RODRIGUEZ Natalia
DUPOUYET Sylvie ADTRF VIROS Justine
FERNANDEZ Catherine PR SAMAIN Adriane
GAUQUELIN Thierry PR
GREFF Stéphane IE
LECAREUX Caroline AI
MEVY Jean-Philippe MC
MONTES Nicolas MC
ORMENO LAFUENTE Elena CR CNRS
PEREZ Thierry DR CNRS
VICENTE Nardo PR

Thèmes

La thématique de cette équipe s’articule autour de l’étude des réponses des organismes, des populations et des écosystèmes aux stress et perturbations : reproduction, croissance, phénologie, métabolismes primaire et secondaire, performances des individus et des écosystèmes (approche écophysiologique ou macro-écophysiologique).

Ces études concernent des écosystèmes qui abritent une forte biodiversité, et/ou différents faciès marquant les paysages où les interactions biotiques sont particulièrement importantes : écosystèmes forestiers (pinèdes, chênaies) et garrigues, communautés du coralligène et grottes semi-obscures marines. Les travaux s’appuient sur des systèmes intégrés d’observation (e.g. O3HP, plateforme CLIMED, récifs du Prado, grottes sous-marines).

Trois grands thèmes sont particulièrement développés :

  • La description de la biodiversité dans toutes ses composantes (diversité spécifique, métabolique et génétique), qui est un pré-requis aux approches de l’équipe ;
  • Les capacités d’adaptation aux changements environnementaux en particulier grâce à l’écologie chimique (métabolomique, interactions chimiques, allélopathie) ;
  • Le rôle de la biodiversité dans le fonctionnement des écosystèmes en se concentrant sur quelques processus clés (e.g. l’utilisation et/ou le recyclage de la MO ; rôle des suspensivores dans les couplages bentho-pélagiques).

Collaborations - Partenariats

L’équipe collabore à travers l’appartenance à plusieurs réseaux (GDR : Biodiversité et Chimiodiversité Marine, GDR Marine French Connection, GRD Médiation Chimique dans l’Environnement- Ecologie Chimique (MediatEC), GDR Phénologie) mais aussi via des programmes impliquant des organismes nationaux (e.g. INRA, IRSTEA, CEA) et des UMR telles que AD2M, CEFE, CEREGE, DIV &CO, ECOLAB, ICSN, LCMBA, LIEBE, LSCE, et Coréus pour ne citer que les principales.

A l’étranger l’équipe possède des collaborations dans des pays du sud de la Méditerranée, comme par exemple les Université de Djelfa, de Tizi Ouzou et Houari Boumédienne (Algérie), le CNR libanais (Liban), l’Institut National d’Agronomie de Tunis (Tunisie).

Elle collabore également avec des centres de recherche reconnus pour leur excellence, comme l’Université de Berkeley ou la « SCRIPPS Research Institution » (USA), le « Centre for Ecology & Hydrology » (UK), l’« Institut for biological Sciences » de l’Université de Würzburg (Allemagne), le Centro de Estudios Avanzados de Blanes et la Station biologique de la Doñana du CSIC (Espagne).

Publications

2016

Bellan-Santini D, Kaim-Malka RA, Dauvin JC In press On Haploops species with the redescription of Haploops vallifera and H. siberica (Crustacea : Gammaridea : Ampeliscidae) (Contribution to the knowledge of the Haploops genus. 9.] Zootaxa
Gavinet J, Prévosto B, Fernandez C 2016 Introducing resprouters to enhance Mediterranean forest resilience : importance of functional traits to select species according to a gradient of pine density. J Appl Ecol On line
Chomel M, Guittonny-Larchevêque M, DesRochers A, Baldy V 2016 Effect of mixing herbaceous litter with tree litters on decomposition and N release in boreal plantationse. Plant and Soil 398(1-2):229-241, doi : 10.1007/s11104-015-2648-5
Chomel M, Larchevêque M, Fernandez C, Gallet C, Desrochers A, Paré D, Baldy V 2016 Secondary metabolites in plant litter : a key trait for ecosystem processes. J Ecol, doi : 10.1111/1365-2745.12644
Fernandez C, Monnier Y, Santonja M, Gallet C, Weston LA, Prévosto B, Saunier A, Baldy V, Bousquet-Mélou A 2016 The Impact of Competition and Allelopathy on the Trade-Off between Plant Defense and Growth in Two Contrasting Tree Species. Frontiers in Plant Sciences, doi : 10.3389/fpls.2016.00594
Gauquelin T, Michon G, Joffre R, Duponnois R, Génin D, Fady B, Bou Dagher M, Derridj A, Slimani S, Badri W, Alifriqui M, Auclair L, Simenel R, Aderghal M, Baudoin E, Galiana A, Prin Y, Sanguin H, Fernandez C, Baldy V 2016 Crossing cultural and ecological approaches to understand Mediterranean forest dynamics facing global change Reg Environm Change OnlineFirst, doi : 10.1007/s10113-016-0994-3
Lavrov DV, Adamski M, Chevaldonné P, Adamska M 2016 Extensive Mitochondrial mRNA Editing and Unusual Mitochondrial Genome Organization in Calcaronean Sponges. Current Biology 26(1):86–92, doi : 10.1016/j.cub.2015.11.043
Mathaux C, Mandin J-P, Oberlin C, Edouard J-L, Gauquelin T, Guibal F online Ancient juniper trees growing on cliffs : towards a long Mediterranean tree-ring chronology. Dendrochronologia 37:79-88, doi : 10.1016/j.dendro.2015.12.005
Prévosto B, Gavinet J, Monnier Y, Corbani A, Fernandez C 2016 Influence of neighbouring woody treatments on Mediterranean oak development in an experimental plantation : Better form but weaker growth. Forest Ecol Management 362:89-98, doi : 10.1016/j.foreco.2015.11.046
Reverter M, Pérez T, Ereskovsky AV, Banaigs B 2016 Secondary Metabolome Variability and Inducible Chemical Defenses in the Mediterranean Sponge Aplysina cavernicola. J Chem Ecol 42(1):60-70, doi : 10.1007/s10886-015-0664-9
Ruiz C, Muricy M, Lage A, Domingos C, Chenesseau S, Pérez T in press Descriptions of new sponge species and genus, including aspiculate Plakinidae, overturn the Homoscleromorpha classification. Zool J Linn Soc
Saint-Lary L, Roy C, Paris J-P, Martin J-F, Thomas OP, Fernandez X 2016 Metabolomics as a tool for the authentication of rose extracts used in flavour and fragrance area. Metabolomics 12:49, doi : 10.1007/s11306-016-0963-3
Romero-Ramirez, A., Bonifácio, P., Labrune C., Sardà R., Amouroux J.M., Bellan, G., Duchêne.J.C., Rachel Hermand R., Ioannis Karakassis I., Grémare A. 2016 Long-term (1998-2010) large-scale comparison of the ecological quality status of Gulf of Lions (NW Mediterranean) benthic habitats. Mar Poll Bull 102 :102-113
Wittmann KJ, Chevaldonné P 2016 Description of Heteromysis (Olivemysis) ekamako sp. nov. (Mysida : Mysidae : Heteromysinae) from a marine cave at Nuku Hiva Island (Marquesas, French Polynesia, Pacific Ocean). Mar Biodiv, doi : 10.1007/s12526-016-0522-1
Sanguin H, Mathaux C, Guibal F, Prin Y, Mandin JP, Gauquelin T, Duponnois R 2016 Ecology of vertical life in harsh environments : The case of mycorrhizal symbiosis with secular cliff climbing trees (Juniperus phoenicea L.) J. Arid Environ., 134 : 132-135, doi 10.1016/j.jaridenv.2016.07.008

2015

Baldy V, Thiébaut G, Fernandez C, Sagova-Mareckova M, Korboulewsky N, Monnier Y, Perez T, Trémolières M 2015 Experimental assessment of the water quality influence on the phosphorus uptake of an invasive aquatic plant : biological responses throughout its phonological stage. PLoS ONE 10(3) : e0118844, doi : 10.1371/journal.pone.0118844
Basso L, Vázquez-Luis M, García-March JR, Deudero S, Alvarez E, Vicente N, Duarte CM, Hendriks IE in press The Pen Shell, Pinna nobilis : A Review of Population Status and Recommended Research Priorities in the Mediterranean Sea. Advances in Marine Biology 71(3):109-160, doi : 10.1016/bs.amb.2015.06.002
Bauvais C, Zirah S, Piette L, Chaspoul F, Domart-Coulon I, Chapon V, Gallice P, Rebuffat S, Pérez T, Bourguet-Kondracki ML 2014 Sponging up metals : Bacteria associated with the marine sponge Spongia officinalis. Marine Environm Res 104:20-30, doi : 10.1016/j.marenvres.2014.12.005
Boury-Esnault N, Vacelet J, Reiswig HM, Fourt M, Aguilar R, Chevaldonné P 2015 Mediterranean hexactinellid sponges, with the description of a new Sympagella species (Porifera, Hexactinellida). J Marine Biol Ass UK 95(07):1353-1364, doi : 10.1017/S0025315414001891
Cachet N, Genta-Jouve G, Ivanisevic J, Chevaldonné P, Sinniger F, Culioli G, Pérez T, Thomas OP 2015 Metabolic profiling reveals deep chemical divergence between two morphotypes of the zoanthid Parazoanthus axinellae. Scientific Reports 5:8282, doi : 10.1038/srep08282
Chevaldonné P, Pérez T, Crouzet J-M, Bay-Nouailhat W, Bay-Nouailhat A, Fourt M, Almon B, Pérez J, Aguilar R, Vacelet J 2015 Unexpected records of ‘deep-sea’ carnivorous sponges Asbestopluma hypogea in the shallow NE Atlantic shed light on new conservation issues. Marine Ecology 36(3):475-484, doi : 10.1111/maec.12155
Chevaldonné P, Rastorgueff P-A, Arslan D, Lejeusne C 2015 Molecular and distribution data on the poorly-known, elusive, cave mysid Harmelinella mariannae (Crustacea : Mysida). Marine Ecology 36(3):305-317, doi : 10.1111/maec.12139
Chomel M, Guittonny-Larchevêque M, DesRochers A, Baldy V 2015 Home Field Advantage of Litter Decomposition in Pure and Mixed Plantations Under Boreal Climate. Ecosystems 18 (6) : 1014-1028 doi : 10.1007/s10021-015-9880-y
Coulis M, Fromin N, David J-F, Gavinet J, Clet A, Devidal S, Roy J, Hättenschwiler S online Functional dissimilarity across trophic levels as a driver of soil processes in a Mediterranean decomposer system exposed to two moisture levels. Oikos 24(10) : 1304-1316 doi : 10.1111/oik.01917
Díaz MC, Thacker RW, Redmond NE, Perez T, Collins AG 2015 Vansoestia caribensis gen. nov., sp. nov. : first report of the family Ianthellidae (Verongida, Demospongiae) in the Caribbean. Zootaxa 3956:3, doi : 10.11646/zootaxa.3956.3.5
Gavinet J, Vilagrosa A, Chirino E, Granados ME, Vallejo VR, Pévosto B 2015 Hardwood seedling establishment below Aleppo pine depends on thinning intensity in two Mediterranean sites. Annals of Forest Science, doi : 10.1007/s13595-015-0495-4
Genard-Zielinski A-C, Boissard C, Fernandez C, Kalogridis C, Gros V, Lathière J, Bonnaire N, Ormeño E 2015 Variability of BVOC emissions from a Mediterranean mixed forest in southern France with a focus on Quercus pubescens. Atmos Chem Phys 15:431-446, doi : 10.5194/acp-15-431-2015
Genta-Jouve G, Boughanem C, Ocaña O, Pérez T, Thomas OP online Eryloside W, a triterpenoid saponin from the sponge Dictyonella marsilii. Phytochemistry Lett 13:252–255, doi : 10.1016/j.phytol.2015.07.004
Hestetun JT, Fourt M, Vacelet J, Boury-Esnault N, Rapp HT 2015 Cladorhizidae (Porifera, Demospongiae, Poecilosclerida) of the deep Atlantic collected during Ifremer cruises, with a biogeographic overview of the Atlantic species. J Marine Biol Ass UK 95(07):1311-1342, doi : 10.1017/S0025315413001100
Muths D, Rastorgueff PA, Selva M, Chevaldonné P 2015 Local scale connectivity in the cave-dwelling brooding fish Apogon imberbis. J Sea Res 95:70-74, doi:10.1016/j.seares.2014.10.009
Prevosto B, Gavinet J, Ripert C, Fernandez C 2015 Identification of windows of emergence and seedling establishment in a pine Mediterranean forest under controlled disturbances. Basic and Applied Ecology,16(1):36-45, doi : 10.1016/j.baae.2014.10.008
Rastorgueff P-A, Bellan-Santini D, Bianchi CN, Bussotti S, Chevaldonné P, Guidetti P, Harmelin JG, Montefalcone M, Morri C, Perez T, Ruitton S, Vacelet J, Personnic S 2015 An ecosystem-based approach to evaluate the ecological quality of Mediterranean undersea caves. Ecological Indicators 54:137-152, doi : 10.1016/j.ecolind.2015.02.014
Rastorgueff P-A, Rocher C, Selva M, Chevaldonné P 2015 Preliminary DNA-based diet assessment of a gutless carnivore, the sponge Asbestopluma hypogea. J Exp Mar Biol Ecol 467:108–114, doi : 10.1016/j.jembe.2015.02.014
Ruiz C, Ivanišević О, Chevaldonné P, Ereskovsky AV, Boury-Esnault N, Vacelet J, Thomas OP, Perez T 2015 Integrative taxonomic description of Plakina kanaky, a new polychromatic sponge species from New Caledonia (Porifera : Homoscleromorpha). Marine Ecology 36(4):1129-1143, doi : 10.1111/maec.12209
Santonja M, Baldy V, Fernandez C, Balesdent J, Gauquelin T 2015 Potential Shift in Plant Communities with Climate Change : Outcome on Litter Decomposition and Nutrient Release in a Mediterranean Oak Forest. Ecosystems,18(7) :1253-1268 doi : 10.1007/s10021-015-9896-3
Santonja M, Fernandez C, Gauquelin T, Baldy V 2015 Climate change effects on litter decomposition : intensive drought leads to a strong decrease of litter mixture interactions - - Plant and Soil, 393(1-2) :69-82 doi : 10.1007/s11104-015-2471-z
Savriama Y, Stige LC, Gerber S, Pérez T, Alibert P, David B 2015 Impact of sewage pollution on two species of sea urchins in the Mediterranean Sea (Cortiou, France) : Radial asymmetry as a bioindicator of stress. Ecological indicators 54:39–47
Trigos S, Garcıa-March J-R, Vicente N, Tena J, Torres J online Respiration rates of the fan mussel Pinna nobilis at different temperatures. Journal of Molluscan Studies, doi : 10.1093/mollus/eyu075
Vieira C, Gaubert J, De Clerck O, Payri C, Culioli G, Thomas OP online Biological activities associated to the chemodiversity of the brown algae belonging to genus Lobophora (Dictyotales, Phaeophyceae). Phytochemistry Rev, doi : 10.1007/s11101-015-9445-x

2014

Cellier A, Gauquelin T, Baldy V, Ballini C 2014 Effect of organic amendment on soil fertility and plant nutrients in a post-fire Mediterranean ecosystem. Plant Soil 376(1-2):211-228, doi : 10.1007/s11104-013-1969-5
Chomel M, DesRochers A, Baldy V, Larchevêque M, Gauquelin T 2014 Non-additive effects of mixing hybrid poplar and white spruce on aboveground and soil carbon storage in boreal plantations. Forest Ecology and Management 328:292–299, doi : 10.1016/j.foreco.2014.05.048
Chomel M, Fernandez C, Bousquet-Mélou A, Gers C, Monnier Y, Santonja M, Gauquelin T, Gros R, Lecareux C, Baldy V 2014 Secondary metabolites of Pinus halepensis alter decomposer organisms and litter decomposition during afforestation of abandoned agricultural zones. J Ecol 102(2):411-424, doi : 10.1111/1365-2745.12205
Genard-Zielinski A-C, Ormeño E, Boissard C, Fernandez C 2014 Isoprene emissions from downy oak under water limitation during an entire growing season : what cost for growth ? PLoS ONE 9(11):e112418, doi : 10.1371/journal.pone.0112418
Greff S, Zubia M, Genta-Jouve G, Massi L, Perez T, Thomas OP 2014 Mahorones, highly brominated cyclopentenones from the red alga Asparagopsis taxiformis. J Nat Prod 77(5):1150-1155, doi : 10.1021/np401094h
Gentner D.R. Ormeño E., Fares S., Ford T.B, Park J.P., Brioude J., Angevine W, Karlik J.F, Goldstein A.H. Emissions of biogenic gas-phase organic carbon from agriculture and their implications for air quality. Atmospheric Chemistry and Physics 2014. 14, 5393-5413.
Kalogridis C, Gros V, Sarda-Esteve R, Langford B, Loubet B, Bonsang B, Bonnaire N, Nemitz E, Genard A-C, Boissard C, Fernandez C, Ormeño E, Baisnée D, Reiter I, Lathière J 2014 Concentrations and fluxes of isoprene and oxygenated VOCs at a French Mediterranean oak forest. Atmos Chem Phys 14:10085-10102, doi : 10.5194/acp-14-10085-2014
Personnic S, Boudouresque CF, Astruch P, Ballesteros E, Blouet S, Bellan-Santini D, Bonhomme P, Thibault-Botha D, Feunteun E, Harmelin-Vivien M, Pergent G, Pergent-Martini C, Pastor J, J-C Poggiale, Renaud F, Thibaut T, Ruitton S online An ecosystem-based approach to assess the status of a Mediterranean ecosystem, the Posidonia oceanica seagrass meadow. PLoS ONE doi : 10.1371/journal.pone.0098994
Rastorgueff PA, Chevaldonné P, Arslan D, Verna C, Lejeusne C 2014 Cryptic habitats and cryptic diversity : unexpected patterns of connectivity and phylogeographic breaks in a Mediterranean endemic marine cave mysid. Molecular Ecology 23(11):2825-2843, doi : 10.1111/mec.12776
Trigos S, Garcia-March JR, Vicente N, Tena J, Torres J 2014 Utilization of muddy detritus as organic matter source by the fan mussel Pinna nobilis. Medit Mar Sci 15(3):667-674, doi : 10.12681/mms.836

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2013
Aït Saïd S, Torre F, Derridj A, Gauquelin T, Mevy JP 2013 Gender, Mediterranean drought and seasonality : photosystem II photochemistry in Pistacia lentiscus L. Photosynthetica 51 (4):552-564, doi : 10.1007/s11099-013-0055-9
Audoin C, Bonhomme D, Ivanišević J, De la Cruz M, Cautain B, Monteiro MC, Reyes F, Rios L, Pérez T, Thomas OP 2013 Balibalosides, an original family of glycosilated sesterterpenes produced by the Mediterranean sponge Oscarella balibaloi. Marine Drugs 11(5):1477-1489, doi : 10.3390/md11051477
Borda E, Kudenov JD, Chevaldonné P, Blake JA, Desbruyères D, Fabri MC, Hourdez S, Pleijel F, Shank TM, Wilson NG, Schulze A, Rouse GW 2013 Cryptic species of Archinome (Annelida : Amphinomida) from vents and seeps. Proc Royal Soc B 280(1770):20131876, doi : 10.1098/rspb.2013.1876
Boury-Esnault N, Lavrov D, Ruiz C, Pérez T 2013 The integrative taxonomic approach applied to Porifera : a case-study of the Homoscleromorpha. Integr & Comparat Biol 53(3):416-427, doi : 10.1093/icb/ict042
Ereskovsky AV, Dubois M, Ivanišević J, Gazave E, Lapebie P, Tokina D, Pérez T 2013 Pluri-annual study of the reproduction of two Mediterranean Oscarella species (Porifera, Homoscleromorpha) : cycle, sex-ratio, reproductive effort and phenology. Marine Biol 160(2):423-438, doi : 10.1007/s00227-012-2100-9
Fernandez C, Santonja M, Gros R, Monnier Y, Chomel M, Baldy V, Bousquet-Mélou A 2013 Allelochemicals of Pinus halepensis as drivers of biodiversity in Mediterranean open mosaic habitats during the colonization stage of secondary succession. J Chem Ecol 39(2):298-311, doi : 10.1007/s10886-013-0239-6
Garrido M, Lafabrie C, Torre F, Fernandez C, Pasqualini V 2013 Resilience and stability of Cymodocea nodosa seagrass meadows over the last four decades in a Mediterranean lagoon. Est Coast Shelf Sci 130 : 89-98, doi : 10.1016/j.ecss.2013.05.035
Gérard K, Guilloton E, Arnaud-Haond S, Aurelle D, Bastrop R, Chevaldonné P, Derycke S, Hanel R, Lapègue S, Lejeusne C, Mousset S, Ramšak A, Remerie T, Viard F, Féral J-P, Chenuil A 2013. PCR survey of 50 introns in animals : cross-amplification of homologous EPIC loci in eight non-bilaterian, protostome and deuterostome phyla. Marine Genomics 12:1-8, doi : 10.1016/j.margen.2013.10.001
Janssen A, Chevaldonné P, Martinez-Arbizu 2013 The meiobenthic copepod fauna of a marine cave (3PP cave, NW Mediterranean) closely resembles that of deep-sea communities. Marine Ecol Progr Ser 479:99-113, doi : 10.3354/meps10207
Lavoir AV, Ormeño E, Pasqualini V, Ferrat L, Greff S, Lecareux C, Vila B, Mevy JP, Fernandez C 2013 Does prescribed burning affects the secondary metabolism of established stand trees of Mediterranean pines ? J Chem Ecol 39(3):398-412, doi : 10.1007/s10886-013-0256-5
Monnier Y, Bousquet-Mélou A, Vila B, Prevosto B, Fernandez C 2013 How nutrient availability influences acclimation to shade of two (pioneer and late-successional) Mediterranean tree species ? Eur J Forest Res 132(2):325-333, doi : 10.1007/s10342-012-0677-7
San Roman Sanz A, Fernandez C, Mouillot F, Ferrat L, Istria D, Pasqualini V 2013 Long-term forest dynamics and land-use abandonment in the Mediterranean mountains (Corsica, France). Ecol Soc 18(2):38, doi : 10.5751/ES-05556-180238
Stiller J, Rousset V, Pleijel F, Chevaldonné P, Vrijenhoek RC, Rouse GW 2013 Phylogeny, biogeography and systematics of hydrothermal vent and methane seep Amphisamytha (Ampharetidae, Annelida), with descriptions of three new species. Syst Biodiv 11(1):35-65, doi : 10.1080/14772000.2013.772925
Tahiri H, Otto T, Eddouks M, Revel J-C, Jalut G, Alifriqui M, Gauquelin T, Hafidi M 2013 Étude pédo-anthracologique dans la région de Toufliht (Haut Atlas Marocain) : Mise en évidence d’un paléo-incendie et d’un changement de la couverture forestière vers 4500 – 4000 BP (5300 – 4200 cal. BP). La Terre et la Vie 68(3):231-242
Zarrouk S, Ereskovsky AV, Ben Mustapha K, El Abed A, Pérez T 2013 Sexual reproduction of Hippospongia communis (Lamarck, 1814) (Dictyoceratida, Demospongiae) : comparison of two populations living under contrasted environmental conditions. Marine Ecol Evol Persp 34 (4):432–442, doi : 10.1111/maec.12043

2012

Auclerc A, Nahmani J, Aran D, Baldy V, Callot H, Gers C, Iorio E, Lapied E, Lassauce A, Pasquet A, Spelda J, Rossi J-P, Guérold F 2012 Changes in soil macroinvertebrate communities following liming of acidified forested catchments in the Vosges Mountains (North-eastern France). Ecol Engin 42:260-269, doi : 10.1016/j.ecoleng.2012.02.024
Borda E, Kudenov JD, Blake JA, Alvarad J, Chevaldonné P, Desbruyères D, Fabri MC, Hourdez S, Pleijel F, Schulz, A, Shank TM, Rouse GW 2012 Cryptic species of Archinome (Annelida : Amphinomida) from hydrothermal vents and cold seeps. Society for Integrative & Comparative Biology, Annual Meeting, Charleston, SC, USA, 3-7 January 2012. Integr Comparative Biology 52 (Suppl. 1) : E17
Cardenas P, Pérez T, Boury-Esnault N 2012 Sponge systematics facing new challenges. Adv Marine Biol 61:79-209, doi : 10.1016/B978-0-12-387787-1.00010-6
Cellier A, Francou C, Houot S, Ballini C, Gauquelin T, Baldy V 2012 Use of urban composts for the regeneration of a burnt Mediterranean soil. J Env Mgmt 95:S238-S244, doi : 10.1016/j.jenvman.2010.10.042
Dauvin J-C, Alizier A, Rolet C, Bakalem A, Bellan G, Gomez Gesteira JL, Grimes S, De la Ossa-C JA, Del Pilar Ruso Y, R 2012 Response of different benthic indices to diverse human pressures. Ecol Indic 12:143–153, doi : 10.1016/j.ecolind.2011.03.019
Fares S, Park JH, Gentner DR, Weber R, Ormeno E, Karlik J, Goldstein AH 2012 Seasonal cycles of biogenic volatile organic compound fluxes and concentrations in a California citrus orchard. Atmosph Chem Phys 12:9865-9880, doi : 10.5194/acp-12-9865-2012
Fernandez C, Ferrat L, Pergent G, Pasqualini V 2012 Sea urchin-seagrasses interactions : trophic links in a benthic ecosystem from a coastal lagoon. Hydrobiol 699(1):21-33, doi : 10.1007/s10750-012-1151-8
Korboulewsky N, Wang R, Baldy V 2012 Purification processes involved in sludge treatment by a vertical flow wetland system : focus on the role of the substrate and plants on N and P removal. Biores Technol 105:9-14, doi : 10.1016/j.biortech.2011.11.037
Mevy JP, Bessiere JM, Dherbomez M 2012 Composition, antimicrobial and antioxidant activities of the volatile oil of Chrysanthellum americanum (Linn.) Vatke. J Ess Oil Bearing Pl 15(3):489–496, doi : 10.1080/0972060X.2012.10644077
Monnier Y, Prevosto B, Ripert C, Corbani A, Fernandez C 2012 Forest microhabitats differentially influence seedlings phenology of two co-existing Mediterranean oak species. J Veg Sci 23(2):260-270, doi : 10.1111/j.1654-1103.2011.01358.x
Poupin J, Corbari L, Pérez T, Chevaldonné P 2012 Deep-water decapod crustaceans studied with a remotely operated vehicle (ROV) in the Marquesas Islands, French Polynesia (Crustacea : Decapoda). Zootaxa 3550:43-60
Prévosto B, Monnier Y, Rippert C, Fernandez C 2012 To what extent do time, species identity and selected plant response variables influence woody plant interactions ? J Appl Ecol 49(6):1344–1355, doi : 10.1111/jpe.12000
Reveillaud J, Allewaert C, Pérez T, Vacelet J, Banaigs B, Vanreusel A 2012 Relevance of an integrative approach for taxonomic revision in sponge taxa : Case study of the shallow-water Atlanto-Mediterranean Hexadella (Porifera, Ianthellidae, Verongida). Invertebr System 26 (3):230-248, doi : 10.1071/IS11044
Rizvi SH, Gauquelin T, Gers C, Guerold F, Pagnout C, Baldy V 2012 Calcium-magnesium liming of acidified forested catchments : effects on humus morphology and functioning. Appl Soil Ecol 62:81-87, doi : 10.1016/j.apsoil.2012.07.014
Schmitt S, Tsai P, Bell J, Fromont J, Ilan M, Lindquist N, Pérez T, Rodrigo A, Schupp PJ, Vacelet J, Webster N, Hentschel U, Taylor MW 2012 Assessing the complex sponge microbiota : core, variable and species-specific bacterial communities in marine sponges. ISME Journal 6:564-576, doi : 10.1038/ismej.2011.116
Wang R, Baldy V, Périssol C, Korboulewsky N 2012 Influence of plants on microbial activity in a vertical-downflow wetland system treating waste activated sludge with high organic matter concentration. J Env Mgmt 95S:S158-S164, doi : 10.1016/j.jenvman.2011.03.021

2011

Ait Said S, Fernandez C, Greff S, Derridj A, Gauquelin T, Mevy JP 2011 Inter-population variability of leaf morpho-anatomical and terpenoid patterns of Pistacia atlantica desf. ssp. atlantica growing along an aridity gradient in Algeria. Flora 206 (4) : 397–405
Ait Said S, Fernandez C, Greff S, Torre F, Derridj A, Gauquelin T and Mevy JP 2011 Chemoecological variability of terpenoid composition in leaves of Pistacia lentiscus L. from increasing altitude conditions Molecules 16(3) : 2646-2657
Fabi G, Spagnolo A, Bellan-Santini D, Charbonnel E, Cicek BA, Goutayer-Garcia JJ, Jensen AC, Kallianiotis A, Das Santos MN 2011 Overview on artificial reefs in Europe. Braz J Oceanogr Brazilian Journal of Oceanography 59 (special issue CARAH) : 155-166
Fares S, Gentner DR, Park JH, Ormeno E, Allen JK and Goldstein H 2011 Biogenic emissions from Citrus species in California Atmos Envir, 45 (27) : 4557–4568
Genta-Jouve G, Francezon N, Puissant A, Auberger P, Vacelet J, Pérez T, Fontana A, Thomas OP 2011 Structure elucidation of the new citharoxazole from the Mediterranean Deep-Sea Sponge Latrunculia (Biannulata) citharistae. Magn Reson Chem 49(8) : 533–53
Ivanisevic J, Pérez T, Barnathan G, Thomas OP 2011 Lysophospholipids in the Mediterranean sponge Oscarella tuberculata : seasonal variability and putative biological role. J Chem Ecol 37(5) : 537-545
Ivanisevic J, Thomas OP, Pedel L, Penez N, Ereskovsky AV, Culioli G, Pérez T 2011 Biochemical trade-offs : evidence for ecologically linked secondary metabolism of the sponge Oscarella balibaloi. PLOS One 6 (11) doi:10.1371/journal.pone.0028059.g0
Ivanisevic J, Thomas OP, Lejeusne C, Chevaldonné P, Pérez T 2011 Metabolic fingerprinting as an indicator of biodiversity : towards understanding inter-specific relationships among Homoscleromorpha sponges. Metabolomics 7 : 289–304
Monnier Y, Vila B, Montes N, Prevosto B, Bousquet-Mélou A, Fernandez C 2011 Fertility and allelopathy modify Aleppo pine crown acclimation to shade. Tree-Struct Funct. 25:497–507
Olivier R, Lavoir AV, Ormeño E, Greff S, Staudt M, Fernandez C 2011 Compost spreading in Mediterranean shrubland indirectly increases biogenic emissions by promoting growth of VOC-emitting plant parts. Atmos Environ. 45 : 3631-3639
Olivier R, Staudt M, Lavoir AV, Ormeño E, Rizvi H, Baldy V, Rivoal A, Greff S, Lecareux C, Fernandez C 2011 Direct and indirect impact of sewage sludge compost spreading on Quercus coccifera monoterpene emissions in a Mediterranean shrubland. Environl Pollut. 159 (4) : 963-969. doi:10.1016/j.envpol.2010.12.003
Ormeño E, Niinemets AG 2011 Extracting and trapping biogenic volatile organic compounds stored in plant species. TRAC-Trend Anal Chem 30 (7) : 978–989
Penez N, Culioli G, Pérez T, Briand JF, Thomas OP, Blache Y. 2011. Antifouling Properties of Simple Indole and Purine Alkaloids from the Mediterranean Gorgonian Paramuricea clavata. J Nat Prod 74, 2304–2308
Pérez T, Ivanisevic J, Dubois M, Pedel L, Thomas OP, Tokina D, Ereskovsky AV 2011 Oscarella balibaloi, a new sponge species (Homoscleromorpha : Plakinidae) from the Western Mediterranean Sea : cytological description, reproductive cycle and ecology. Marine Ecol 32(2) : 174–187
Prevosto B, Bousquet-Mélou A, Ripert C, Fernandez C 2011 Effects of different silvicultural treatments on vegetation composition and diversity in Pinus halepensis woodlands. Plant Ecol 212 : 627–638
Prévosto B, Monnier Y, Ripert C, Fernandez C 2011 Diversification of Allepo pine forests by sowing Quercus ilex and Quercus pubescens acorns : testing the effects of different vegetation and soil treatments. European Journal of Forest Research. 130 (1) : 67-76.
Prévosto B, Monnier Y, Ripert C, Fernandez C 2011 Can we use shelterwoods in Mediterranean pine forests to promote oak seedling development ? Forest Ecol and Manag 262 (8) : 1426-1433.
Rastorgueff PA, Harmelin-Vivien M, Richard P, Chevaldonné P 2011 Feeding strategies and resource partitioning mitigate the effects of oligotrophy for marine cave mysids. Mar Ecol-Prog Ser 440 : 163-176.
Rivoal A, Fernandez C, Greff S, Montes N, Vila B 2011. Does competition stress decrease allelopathic potential ? Biochem Syst Ecol. 39 (4-6) : 401-407.
The Mermex Group 2011. Marine Ecosystem responses to climatic and anthropogenic forcings in the Mediterranean Sea. Progr Oceanogr 91(2) : 97-16

Rapport UNEP CAR/ASP Changements climatiques en Méditerranée

Programmes en cours

ANR SecPriMe2 (2012-2017) - Coordinatrice Catherine Fernandez (IMBE)- Partenaires : IMBE (UMR 7263) - LSCE (UMR 8212) - UR GSE (INRA) - IBEB (CEA) - Collaborateurs : Ecolab (UMR 5245), LCE (AMU), Univ. Liège, OHP (UMS Pytheas 3470)
http://secprime.imbe.fr/

PrimeQual ADEME CERVOLAND (2017-2020) - Coordinatrice Emilie PERRAUDIN (EPOC) Partenaires : EPOC, IMBE, EMD-SAGE

PrimeQual ADEME HONO CORN (2017-2019) - Coordinateur Henri Wortham (LCE). Partenaires LCE IMBE

EC2CO BIOHEFECT SIMPA (2016-2017)- Coordinatrice Anne Bousquet-Mélou- Partenaires IMBE LCE CEFE

LANDEX Episodes 1 Prg LEFE CNRS (2016-2018). Coordinateur Partenaires EPOC, CEFE, EMD, INERIS, ISPA, LA, LCE, LGGE, LISA, LSCE, PC2A, IMBE

CHEM-SEASCAPE PEPS PAysage CNRS (2016) Coordinateur Thierry Perez Partenaires IMBE, DIV&CO, COMEX, NUIG

Diversité Métabolomique des organismes Marins (2013-2016) - Coordinateur : T. Perez - Financement Fondation TOTAL - Partenaires : IMBE (UMR 7263), INC (UMR7272).