Publications indexées à comité delecture

49. Delcourt, N., Rébufa, C., Dupuy, N., Boukhdoud N., Brunel C., Abadie, J., Giffard, I., Farnet-Da Silva, A.M., 2019, Infrared spectroscopy reveals different soil chemical signatures depending on land use : a case study on olive orchards and typical Mediterranean forests. Accepted in Science of the Total Environment,

48. KHEIR, M., ROCHE, P., ZIARELLI, F., FARNET DA SILVA, A.M., 2019, Mediterranean coastal conditions and litter type drive litter microbial responses to drought stress, Eur. J. Soil Sci, 1-13.

47. GONZÁLEZ BAUTISTA, E., ALARCON GUTIERREZ, E., DUPUY N., GAIME-PERRAUD I., ZIARELLI F., FARNET DA SILVA A.M., 2019, Pre-treatment of a sugar-cane bagasse-based substrate prior to saccharification : effect of coffee pulp and urea on laccase and cellulase activities of Pycnoporus sanguineus, Journal of Environmental Management, 239, 178-186.

46.FARNET-DA SILVA, A.M., FERRÉ, E., DUPUY, N., DE LA BOUSSINIÈRE, A., RÉBUFA, C., 2017. Infra-red spectroscopy reveals chemical interactions driving water availability for enzyme activities in litters of typical Mediterranean tree species. Soil Biology and biochemistry, 114, 72-81.

45.HERNANDEZ, C. A. ; ZIARELLI, F., GAIME, I., FARNET DA SILVA A.M., ALARCÓN E., 2017, Chemical and Biological Pretreatments on Sugarcane Bagasse to Enhance its Enzymatic Hydrolysis, Chemistryselect, 2, 4213-4218.

44.BOUKHDOUD, N., FARNET DA SILVA A. M. DARWISH, T., GROS, R., 2017. Olive mill waste and glyphosate-based herbicide addition to olive grove soils : effects on microbial activities and their responses to drying/rewetting cycles, Soil Use and Management, 333, 499-510.

43. BRUNEL, C., GROS, R., ZIARELLI, F., FARNET DA SILVA A.M., 2017.Additive or non-additive effect of mixing oak in pine stands on soil properties depends on the tree species in Mediterranean forests. The Science of the total environment, 590-591 : 676-6855

42.HERNANDEZ C., FARNET DA SILVA A.M., ZIARELLI F., PERRAUD-GAIME I., GUTIERREZ-RIVERA B., GARCIA-PEREZ J.A., ALARCON E., 2016, Laccase induction by synthetic dyes in Pycnoporus sanguineus and their possible use for sugar cane bagasse delignification, Appl. Microb. Biotechnol., 1-13

41. NEHMTOW J, RABIER J, GIGUEL R, COULOMB B, FARNET AM, PERISSOL C, ALARY A, LAFFONT-SCHWOB I 2016, Evaluation of an integrated constructed wetland to manage pig manure under Mediterranean climate. Environ Sci Pollut Res, 23 : 16383-16395.

40. BOUKHDOUD, N., GROS, R., DARWISH, T., FARNET DA SILVA A. M. *, 2016, Effect of agricultural practices and coastal constraints on soil microbial functional properties in Mediterranean olive orchards, European Journal of Soil Sciences, 67 : 470-477

39. FARNET DA SILVA, A.M , BOUKHDOUD, N., GROS R., 2016, Distance from the sea as a driving force of microbial communities under water potential stresses in litters of two typical Mediterranean plant species, Geoderma, 269:1-9.

38. HERNÁNDEZ C., SANDOVAL N., MALLERMAN J., GARCÍA-PÉREZ J., FARNET A.M., PERRAUD-GAIME I., ALARCÓN E., 2015, Ethanol induction of laccase depends on nitrogen conditions of Pycnoporus sanguineus Electronic Journal of Biotechnology 18 (4) : 327-332. doi:10.1016/j.ejbt.2015.05.008.

37. QASEMIAN L., GUIRAL, D., FARNET A.M., 2014, How do microlocal environmental variations affect microbial activities of a Pinus halepensis litter in a Mediterranean coastal area ? Science of the Total Environment. 496 : 398-205. (IF=3.163, Q1)

36. FARNET A.M., QASEMIAN L., PETER-VALENCE F., RUAUDEL F., SAVOIE J.M., ROUSSOS S., GAIME-PERRAUD I., ZIARELLI F. and FERRE F.,2014, Do spawn storage conditions influence the colonization capacity of a wheat-straw based substrate by Agaricus subrufescens ?CRAS/Biology. 337 : 443-450. (IF=1.632 Q2)

35. CHEVREMONT, A.-C., BOUDENNE,J.-L., COULOMB, B., FARNET, A.-M.,2013, Fate of carbamazepine and anthracene in soils watered with UV-LED treated wastewaters. Water Research. 47 : 6574-6584
(IF=4.655 Q1)

34. FARNET A.M.*, QASEMIAN L., GIL G. AND FERRÉ E., 2013, The importance of water availability in the reaction equilibrium of hydrolases in forest litters from a Mediterranean area : a study on lipases, European Journal of Soil Science, 1-6.(IF=2.651 Q1)

33. LLARENA-HERNÁNDEZ R.C., LARGETEAU M.L., FARNET A.M., FOULONGNE-ORIOL M., FERRER N., REGNAULT-ROGER C., SAVOIE J.M., 2013, Potential of European wild strains of Agaricus subrufescens for productivity and quality on wheat straw based compost, World Journal of Microbiology and Biotechnology. 29:1243-1253.(IF=1.262 Q3)

32. FARNET, A.M.*, QASEMIAN, L., PETER-VALENCE, F., SAVOIE, J. M., RUAUDEL, F., F., FERRÉ , E.,2013. Capacity for colonisation and degradation of horse manure and wheat-straw- based compost by different strains of Agaricus subrufescens during the first two weeks of cultivation, Bioresource Technology. 131, 266–273. (IF=4.750 Q1).

31. CHEVREMONT, A.-C., BOUDENNE,J.-L., COULOMB, B., FARNET, A.-M.,2013, Impact of watering with UV-LED-treated wastewater on microbial and physico-chemical parameters of soil. Water Research, 47, 1971-1982.(IF=4.655 Q1)

30. QASEMIAN, L., BILLETTE, C., GUIRAL, D., ALAZARD, E., MOINARD, M., FARNET, A.-M., 2012, Halotolerant laccases from Chaetomium sp., Xylogone sphaerospora, and Coprinopsis sp. isolated from a Mediterranean coastal area, Fungal Biology, 116, 1090-1098.

29. QASEMIAN, L., GUIRAL, D., ZIARELLI, F., RUAUDEL, F.AND FARNET, A.M., 2012, Does anthracene affect microbial activities and organic matter decomposition ? A comparative study in Pinus halepensis litters from Mediterranean coastal and inland areas, Chemosphere, 89, 548–555. (IF=3.05, Q1).

28. CISSOKHO, I., FARNET, A.-M., FERRÉ, E., BERTRAND, M.P., GIL, G. AND GASTALDI, S., 2012, Enzyme-triggered Radical Reactions : Another Approach For Tin-free Radical Chemistry, Chimia, 66, 435-438. (IF=1.58, Q2)

27. CHEVREMONT, A.-C., FARNET, A.-M., COULOMB, B., BOUDENNE, J.-L., 2012, Effect of coupled UV-A and UV-C LEDs on both microbiological and chemical pollution of urban wastewaters, Science of the Total Environment, 42, 304-310.(IF=3.190, Q1).

26. QASEMIAN, L., GUIRAL, D., ZIARELLI, F., VAN DANG, T. K., FARNET, A.M., 2012, Effects of anthracene on microbial activities and organic matter decomposition in a Pinus halepensis litter from a Mediterranean coastal area, Soil Biology and Biochemistry, 46, 148-154. (IF=3.242, Q1).

25. CHEVREMONT, A.C., FARNET, A.M., SERGENT, M., COULOMB, B., BOUDENNE, J.L., 2012, Multivariate optimization of faecal bioindicator inactivation by coupling UV-A and UV-C LEDs, Desalination, 285, 219-225 . (IF=1.851, Q1).

24. PETER-VALENCE, F., LLARENA –HERNANDEZ, C., LARGETEAU, M., SAVOIE, J. M., RUAUDEL, F., ZIARELLI, F., FERRÉ , E., FARNET A.M.*, 2011, Chemical characterization of the biomass of edible medicinal mushroom, Agaricus subrufescens, via solid-state 13C NMR, Journal of Agricultural and Food Chemistry, 59, 8939–8943. (IF=2.816, Q1).

23. QASEMIAN, L., GUIRAL, D., BELGHAZI, M., GROS, R., ALAZARD, E., FERRE, E. and FARNET A.M., 2011, Identification of various laccases induced by anthracene and contribution to its degradation in a Mediterranean coastal pine litter, Chemosphere, 84, 1321-1328. (IF=3.155, Q1).

22. FARNET, A.M.*, CHEVREMONT, A.C., GIL, G., GASTALDI, S, FERRE, E., 2011, Alkylphenol oxidation with a laccase from a white-rot fungus : Effects of culture induction and of ABTS used as a mediator , Chemosphere, 82, 284-289.(IF=3.05, Q1)

21. FARNET, A.M.*, FERRE, E., GIL, G., GASTALDI, S., 2010, A new substrate to measure laccase activities in complex environments : application to litters, Soil Biology an Biochemistry, 42, 1001-1005 (IF=3.242, Q1).

20. FARNET A.M.*, QASEMIAN L., GOUJARD L., GIL G., GUIRAL D., RUAUDEL F., FERRE E., 2010, A modified method based on p-nitrophenol assay to quantify hydrolysis activities of lipases in litters, Soil Biology an Biochemistry, 42:386-389. (IF=3.242, Q1).

19. FARNET A.M.*, QASEMIAN L., GUIRAL D., FERRE E.,2010, A modified method based on arsenomolybdate complex to quantify cellulase activities : application to litters. Pedobiologia,53, 159-160.

18. FARNET A.M.*, PRUDENT P., ZIARELLI F., DOMEIZEL M., GROS R. 2009, Solid-state 13C NMR to assess organic matter transformation in a subsurface wetland under cheese-dairy farm effluents. Bioresource Technology, 100 : 4899-4902 (IF=4.45 Q1)

17. GOUJARD L., FERRE E., GIL G. RUAUDEL F., FARNET A.M.* 2009, A method to quantify transesterification activities of lipases in litters, Journal of Microbiological Method, 78:127-130. (IF=2.00 Q2)

16. FARNET A.M.*, GIL G., RUAUDEL F., CHEVREMONT A.C. , FERRE E. 2009, Polycyclic aromatic hydrocarbon transformation with laccases of a white-rot fungus isolated from a Mediterranean schlerophyllous litter. Geoderma, 149 : 247-271. (IF=2.07 Q1)

15. C.COQUET, E. FERRE, D. PEYRONEL, C. DAL FARRA, FARNET A. M.*, 2008. Identification of new molecules extracted from Quercus suber L. cork, Compte Rendu de l’Académie des Sciences, Sciences de la Vie/Life Sciences, 331:853-858. (IF=1.632 Q2)

14. VELAZQUEZ-CEDENO M., FARNET A.M.*, G. MATA, J.-M. SAVOIE, 2008. Role of Bacillus spp. in antagonism between Pleurotus ostreatus and Trichoderma harzianum in heat-treated wheat-straw substrates, Bioresource Technology, 99 : 6966-6973. (IF=4.45 Q1)

13. FARNET A.M.*, PRUDENT P., CIGNA M., GROS R., 2008. Soil microbial activities in a constructed reed-bed under cheese-dairy farm effluents, Bioresource Technology, 99 : 6198-6206. (IF=4.45 Q1)

12. FARNET A.M.* GIL G., FERRE E., 2008. Effects of pollutants on laccase activities of Marasmius quercophilus, a white-rot fungus isolated from a Mediterranean schlerophyllous litter, Chemosphere, 70 : 895-900. (IF=3.05, Q1)

11. VELAZQUEZ-CEDENO M., FARNET A.M.*, BILLETTE C., MATA G., SAVOIE J.-M. 2007. Interspecific interactions with Trichoderma longibrachiatum induce Pleurotus ostreatus defence reactions based on the production of laccase isozymes, Biotechnology Letters, 29:1583-1590. (IF= 1.595)

10. COQUET C, BAUZA E, OBERTO G, BERGHI A, FARNET AM, FERRE E, PEYRONEL D, DAL FARRA C, DOMLOGE N. 2005. Quercus suber cork extract displays a tensor and smoothing effect on human skin : an in vivo study. Drugs Experimental and Clinical Research, 31 : 89-99. (IF = 1.152 Q2)

9. FARNET A.M.*, CRIQUET S., CIGNA M., GIL G. AND FERRÉ E., 2004, Purification of a laccase from Marasmius quercophilus induced with ferulic acid : reactivity towards natural and xenobiotic aromatic compounds, Enzyme and Microbial Biotechnology 34:549-554 (IF= 1.705 Q2)

8. VELÁZQUEZ-CEDEÑO M.A., A.M. FARNET*, E. FERRÉ, J.M. SAVOIE, 2004, Variations in lignocellulosic activities in dual cultures of Pleurotus ostreatus and Trichoderma longibrachiatum on non sterilized wheat straw. Mycologia, 96 : 712-719 (IF= 1.525 Q2)

7. CRIQUET S., FERRÉ E., FARNET A.M. AND LE PETIT J. 2004. Annual dynamics of phosphatase activities in an evergreen oak litter : influence of biotic and abiotic factors, Soil Biology and Biochemistry, 36, 7:1111-1118. (IF=3.242, Q1).

6. FARNET A.M.*, CRIQUET S., POCACHARD E., GIL G. AND FERRE E. 2002. Effect of an induced laccase on aromatic compounds. Purification of a new isoform of laccase from a Marasmius quercophilus strain isolated from a cork oak litter (Quercus suber L.), Mycologia, 94 : 735-740. (IF= 1.525 Q2).

5. CRIQUET S., FARNET A.M., AND FERRE E., 2002, Protein measurement in forest litter, Biology and Fertility of Soils , 35 : 307-313. (IF=1.143)

4. FARNET A.-M.*, CRIQUET S., TAGGER S., GIL G., AND LE PETIT J., 2000, Purification, partial characterization and reactivity with aromatic compounds of two laccases from Marasmius quercophilus strain 17, Canadian Journal of Microbiology, 46:189-194. (IF= 1.150).

3. CRIQUET S, FARNET A-M.*, TAGGER S., LE PETIT J. 2000. Annual variations of phenoloxidase activities in an evergreen oak litter. Influence of certain biotic and abiotic factors. Soil Biology and Biochemistry, 32 : 1505-1513. (IF=3.242, Q1).

2. FARNET A.-M.*, TAGGER S., AND LE PETIT J., 1999, Effects of copper and aromatic inducers on the laccases of the white rot fungus Marasmius quercophilus, Compte Rendu de l’Académie des Sciences, Sciences de la Vie/Life Sciences, 322:499-503. (IF= 1.199 Q2).

1. FARNET A.-M.*, ROUX M., AND LE PETIT J., 1999, Genotypic variations among isolates of Marasmius quercophilus, a white-rot fungus isolated from evergreen oak litter, Canadian Journal of Botany,77:884-890. (IF=1.058 Q3).


CHEVREMONT A.C. , FARNET A.M., COULOMB, B., BOUDENNE J .L. Utilisation de diodes UV électroluminescentes pour l’abattement de charges microbiennes d’indicateurs fécaux, 2011, Brevet n° FR 11 00547, Institut National de Protection Industrielle.

LAPADATESCU, C., BARBE, E. , PETER-VALENCE, F., FERRE, E., FARNET, A.M , Procédé de traitement de composés aromatiques polluants, 2011, Institut National de Protection Industrielle.